Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.26□□□□□ -0.61
P01852 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
P01852 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.26□□□□□ -0.61
P01852 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Gm27243-201ENSMUST00000183964 521 ntBASIC11.26□□□□□ -0.61
P01852 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.26□□□□□ -0.61
P01852 Gm37259-201ENSMUST00000193903 849 ntBASIC11.26□□□□□ -0.61
P01852 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.26□□□□□ -0.61
P01852 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.26□□□□□ -0.61
P01852 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.26□□□□□ -0.61
P01852 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
P01852 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
P01852 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.26□□□□□ -0.61
P01852 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
P01852 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P01852 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
P01852 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.25□□□□□ -0.61
P01852 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.25□□□□□ -0.61
P01852 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.25□□□□□ -0.61
P01852 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
P01852 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
P01852 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
P01852 Gm22323-201ENSMUST00000103832 109 ntBASIC11.25□□□□□ -0.61
P01852 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
P01852 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Gm14760-201ENSMUST00000121831 999 ntBASIC11.25□□□□□ -0.61
P01852 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
P01852 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.25□□□□□ -0.61
P01852 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
P01852 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
P01852 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
P01852 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.25□□□□□ -0.61
P01852 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.25□□□□□ -0.61
P01852 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
P01852 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P01852 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
P01852 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.24□□□□□ -0.61
P01852 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
P01852 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P01852 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.24□□□□□ -0.61
P01852 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Gm23270-201ENSMUST00000104055 131 ntBASIC11.24□□□□□ -0.61
P01852 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P01852 Gm11930-201ENSMUST00000117788 190 ntBASIC11.24□□□□□ -0.61
P01852 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.24□□□□□ -0.61
P01852 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
P01852 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.24□□□□□ -0.61
P01852 Gm18304-201ENSMUST00000189162 546 ntBASIC11.24□□□□□ -0.61
P01852 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.24□□□□□ -0.61
P01852 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P01852 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.24□□□□□ -0.61
P01852 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms