Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Cops4O88544 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Cops4O88544 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cops4O88544 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.34□□□□□ -0.59
Cops4O88544 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.34□□□□□ -0.59
Cops4O88544 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cops4O88544 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cops4O88544 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cops4O88544 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cops4O88544 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.33□□□□□ -0.6
Cops4O88544 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cops4O88544 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cops4O88544 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.33□□□□□ -0.6
Cops4O88544 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.33□□□□□ -0.6
Cops4O88544 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.33□□□□□ -0.6
Cops4O88544 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cops4O88544 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.33□□□□□ -0.6
Cops4O88544 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.33□□□□□ -0.6
Cops4O88544 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cops4O88544 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cops4O88544 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.33□□□□□ -0.6
Cops4O88544 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.33□□□□□ -0.6
Cops4O88544 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cops4O88544 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.33□□□□□ -0.6
Cops4O88544 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.33□□□□□ -0.6
Cops4O88544 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cops4O88544 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.33□□□□□ -0.6
Cops4O88544 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.33□□□□□ -0.6
Cops4O88544 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cops4O88544 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.33□□□□□ -0.6
Cops4O88544 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.32□□□□□ -0.6
Cops4O88544 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.32□□□□□ -0.6
Cops4O88544 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cops4O88544 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.32□□□□□ -0.6
Cops4O88544 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cops4O88544 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.32□□□□□ -0.6
Cops4O88544 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cops4O88544 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cops4O88544 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Cops4O88544 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.32□□□□□ -0.6
Cops4O88544 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms