Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10226O88253 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10226O88253 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10226O88253 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Gm10226O88253 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.46□□□□□ -0.9
Gm10226O88253 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Gm10226O88253 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.46□□□□□ -0.9
Gm10226O88253 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Gm10226O88253 Gm27194-201ENSMUST00000175753 2936 ntBASIC9.45□□□□□ -0.9
Gm10226O88253 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.45□□□□□ -0.9
Gm10226O88253 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.45□□□□□ -0.9
Gm10226O88253 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Gm10226O88253 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Gm10226O88253 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Gm10226O88253 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC9.45□□□□□ -0.9
Gm10226O88253 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Gm7857-201ENSMUST00000117957 358 ntBASIC9.45□□□□□ -0.9
Gm10226O88253 Gm12164-201ENSMUST00000121695 551 ntBASIC9.45□□□□□ -0.9
Gm10226O88253 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.45□□□□□ -0.9
Gm10226O88253 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.45□□□□□ -0.9
Gm10226O88253 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Gm10226O88253 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Gm10226O88253 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Gm10226O88253 Gm16505-201ENSMUST00000179981 232 ntBASIC9.45□□□□□ -0.9
Gm10226O88253 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.45□□□□□ -0.9
Gm10226O88253 Gm7003-201ENSMUST00000195089 312 ntBASIC9.45□□□□□ -0.9
Gm10226O88253 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Gm10226O88253 Gm17827-201ENSMUST00000211825 742 ntBASIC9.45□□□□□ -0.9
Gm10226O88253 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.45□□□□□ -0.9
Gm10226O88253 Gm18730-201ENSMUST00000218038 343 ntBASIC9.45□□□□□ -0.9
Gm10226O88253 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Gm10226O88253 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Gm10226O88253 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Gm10226O88253 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Gm10226O88253 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10226O88253 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Gm17435-202ENSMUST00000212699 1998 ntBASIC9.44□□□□□ -0.9
Gm10226O88253 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Gm10226O88253 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Gm10226O88253 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm10226O88253 Gm9947-201ENSMUST00000067599 2920 ntBASIC9.44□□□□□ -0.9
Gm10226O88253 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Gm10226O88253 Gm11511-201ENSMUST00000118146 540 ntBASIC9.44□□□□□ -0.9
Gm10226O88253 Gm12380-201ENSMUST00000119012 544 ntBASIC9.44□□□□□ -0.9
Gm10226O88253 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.44□□□□□ -0.9
Gm10226O88253 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC9.44□□□□□ -0.9
Gm10226O88253 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm10226O88253 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Gm28071-201ENSMUST00000190355 478 ntBASIC9.44□□□□□ -0.9
Gm10226O88253 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.44□□□□□ -0.9
Gm10226O88253 Gm37466-201ENSMUST00000195692 652 ntBASIC9.44□□□□□ -0.9
Gm10226O88253 Gm4607-201ENSMUST00000206649 577 ntBASIC9.44□□□□□ -0.9
Gm10226O88253 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm10226O88253 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm10226O88253 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm10226O88253 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Gm43463-201ENSMUST00000195967 1803 ntBASIC9.44□□□□□ -0.9
Gm10226O88253 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Gm10226O88253 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 Gm43677-201ENSMUST00000198098 2378 ntBASIC9.44□□□□□ -0.9
Gm10226O88253 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10226O88253 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms