Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col5a1O88207 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col5a1O88207 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.94□□□□□ -0.66
Col5a1O88207 Gm22711-201ENSMUST00000116890 133 ntBASIC10.94□□□□□ -0.66
Col5a1O88207 Gm15207-201ENSMUST00000119259 442 ntBASIC10.94□□□□□ -0.66
Col5a1O88207 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col5a1O88207 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.94□□□□□ -0.66
Col5a1O88207 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col5a1O88207 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Col5a1O88207 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.94□□□□□ -0.66
Col5a1O88207 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.94□□□□□ -0.66
Col5a1O88207 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Col5a1O88207 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.94□□□□□ -0.66
Col5a1O88207 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col5a1O88207 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.94□□□□□ -0.66
Col5a1O88207 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Col5a1O88207 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Col5a1O88207 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col5a1O88207 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col5a1O88207 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col5a1O88207 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col5a1O88207 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col5a1O88207 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.94□□□□□ -0.66
Col5a1O88207 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col5a1O88207 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col5a1O88207 Acot6-202ENSMUST00000222921 3622 ntBASIC10.94□□□□□ -0.66
Col5a1O88207 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col5a1O88207 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col5a1O88207 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Col5a1O88207 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col5a1O88207 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Col5a1O88207 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Col5a1O88207 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Gm12030-201ENSMUST00000121917 223 ntBASIC10.93□□□□□ -0.66
Col5a1O88207 Gm5714-201ENSMUST00000197343 566 ntBASIC10.93□□□□□ -0.66
Col5a1O88207 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC10.93□□□□□ -0.66
Col5a1O88207 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Col5a1O88207 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.93□□□□□ -0.66
Col5a1O88207 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.93□□□□□ -0.66
Col5a1O88207 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col5a1O88207 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col5a1O88207 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Col5a1O88207 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Col5a1O88207 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col5a1O88207 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Gm12783-201ENSMUST00000121425 397 ntBASIC10.93□□□□□ -0.66
Col5a1O88207 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.93□□□□□ -0.66
Col5a1O88207 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.93□□□□□ -0.66
Col5a1O88207 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.93□□□□□ -0.66
Col5a1O88207 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Gm22442-201ENSMUST00000157256 144 ntBASIC10.93□□□□□ -0.66
Col5a1O88207 Gm21092-201ENSMUST00000178995 955 ntBASIC10.93□□□□□ -0.66
Col5a1O88207 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.93□□□□□ -0.66
Col5a1O88207 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.93□□□□□ -0.66
Col5a1O88207 Gm5298-201ENSMUST00000201122 892 ntBASIC10.93□□□□□ -0.66
Col5a1O88207 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC10.93□□□□□ -0.66
Col5a1O88207 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.93□□□□□ -0.66
Col5a1O88207 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Col5a1O88207 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col5a1O88207 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Col5a1O88207 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Col5a1O88207 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Col5a1O88207 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col5a1O88207 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Col5a1O88207 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col5a1O88207 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.92□□□□□ -0.66
Col5a1O88207 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Col5a1O88207 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col5a1O88207 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col5a1O88207 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Col5a1O88207 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Col5a1O88207 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
Col5a1O88207 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Col5a1O88207 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col5a1O88207 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Col5a1O88207 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col5a1O88207 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col5a1O88207 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
Col5a1O88207 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col5a1O88207 Gm26013-201ENSMUST00000104404 119 ntBASIC10.92□□□□□ -0.66
Col5a1O88207 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms