Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chrna4O70174 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.38□□□□□ -0.43
Chrna4O70174 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chrna4O70174 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chrna4O70174 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.38□□□□□ -0.43
Chrna4O70174 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.38□□□□□ -0.43
Chrna4O70174 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.38□□□□□ -0.43
Chrna4O70174 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.38□□□□□ -0.43
Chrna4O70174 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.38□□□□□ -0.43
Chrna4O70174 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.38□□□□□ -0.43
Chrna4O70174 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.38□□□□□ -0.43
Chrna4O70174 Gm45865-201ENSMUST00000211815 945 ntBASIC12.38□□□□□ -0.43
Chrna4O70174 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.38□□□□□ -0.43
Chrna4O70174 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Chrna4O70174 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Map1b-203ENSMUST00000223725 2669 ntBASIC12.38□□□□□ -0.43
Chrna4O70174 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chrna4O70174 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.38□□□□□ -0.43
Chrna4O70174 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.38□□□□□ -0.43
Chrna4O70174 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chrna4O70174 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.37□□□□□ -0.43
Chrna4O70174 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chrna4O70174 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Gm23270-201ENSMUST00000104055 131 ntBASIC12.37□□□□□ -0.43
Chrna4O70174 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.37□□□□□ -0.43
Chrna4O70174 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.37□□□□□ -0.43
Chrna4O70174 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.37□□□□□ -0.43
Chrna4O70174 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.37□□□□□ -0.43
Chrna4O70174 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.37□□□□□ -0.43
Chrna4O70174 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chrna4O70174 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Chrna4O70174 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chrna4O70174 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.36□□□□□ -0.43
Chrna4O70174 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chrna4O70174 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Chrna4O70174 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms