Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.42□□□□□ -0.42
ChkaO54804 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
ChkaO54804 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.42□□□□□ -0.42
ChkaO54804 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
ChkaO54804 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.42□□□□□ -0.42
ChkaO54804 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
ChkaO54804 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.41□□□□□ -0.42
ChkaO54804 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ChkaO54804 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.41□□□□□ -0.42
ChkaO54804 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.41□□□□□ -0.42
ChkaO54804 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.41□□□□□ -0.42
ChkaO54804 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.41□□□□□ -0.42
ChkaO54804 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ChkaO54804 Gm35960-201ENSMUST00000202712 767 ntBASIC12.41□□□□□ -0.42
ChkaO54804 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ChkaO54804 Gm5781-201ENSMUST00000219792 443 ntBASIC12.41□□□□□ -0.42
ChkaO54804 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Gm10076-201ENSMUST00000073238 384 ntBASIC12.41□□□□□ -0.42
ChkaO54804 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ChkaO54804 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ChkaO54804 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.41□□□□□ -0.42
ChkaO54804 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.41□□□□□ -0.42
ChkaO54804 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ChkaO54804 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ChkaO54804 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
ChkaO54804 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.4□□□□□ -0.42
ChkaO54804 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ChkaO54804 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.4□□□□□ -0.42
ChkaO54804 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.4□□□□□ -0.42
ChkaO54804 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ChkaO54804 Gm45784-201ENSMUST00000188360 142 ntBASIC12.4□□□□□ -0.42
ChkaO54804 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.4□□□□□ -0.42
ChkaO54804 Gm42937-201ENSMUST00000197360 752 ntBASIC12.4□□□□□ -0.42
ChkaO54804 Gm44958-201ENSMUST00000203734 736 ntBASIC12.4□□□□□ -0.42
ChkaO54804 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.4□□□□□ -0.42
ChkaO54804 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.4□□□□□ -0.42
ChkaO54804 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ChkaO54804 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ChkaO54804 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.4□□□□□ -0.42
ChkaO54804 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ChkaO54804 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ChkaO54804 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ChkaO54804 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.4□□□□□ -0.42
ChkaO54804 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.4□□□□□ -0.42
ChkaO54804 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
ChkaO54804 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
ChkaO54804 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ChkaO54804 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
ChkaO54804 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ChkaO54804 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms