Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Alx4O35137 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.97□□□□□ -0.65
Alx4O35137 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.96□□□□□ -0.65
Alx4O35137 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.96□□□□□ -0.65
Alx4O35137 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.96□□□□□ -0.65
Alx4O35137 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Alx4O35137 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Alx4O35137 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.96□□□□□ -0.65
Alx4O35137 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.96□□□□□ -0.65
Alx4O35137 Gm4271-201ENSMUST00000174444 973 ntBASIC10.96□□□□□ -0.65
Alx4O35137 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 Gm27437-201ENSMUST00000183429 107 ntBASIC10.96□□□□□ -0.65
Alx4O35137 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Alx4O35137 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.96□□□□□ -0.65
Alx4O35137 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.96□□□□□ -0.65
Alx4O35137 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Alx4O35137 Gm17794-201ENSMUST00000220252 955 ntBASIC10.96□□□□□ -0.65
Alx4O35137 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.66
Alx4O35137 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Alx4O35137 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Alx4O35137 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Alx4O35137 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Alx4O35137 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Alx4O35137 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.96□□□□□ -0.66
Alx4O35137 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Alx4O35137 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.96□□□□□ -0.66
Alx4O35137 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.96□□□□□ -0.66
Alx4O35137 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.96□□□□□ -0.66
Alx4O35137 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Alx4O35137 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Alx4O35137 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.95□□□□□ -0.66
Alx4O35137 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.95□□□□□ -0.66
Alx4O35137 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Alx4O35137 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Alx4O35137 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Alx4O35137 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.95□□□□□ -0.66
Alx4O35137 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.95□□□□□ -0.66
Alx4O35137 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.95□□□□□ -0.66
Alx4O35137 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Gm24830-201ENSMUST00000102024 166 ntBASIC10.95□□□□□ -0.66
Alx4O35137 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.95□□□□□ -0.66
Alx4O35137 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.95□□□□□ -0.66
Alx4O35137 Gm11814-201ENSMUST00000119515 929 ntBASIC10.95□□□□□ -0.66
Alx4O35137 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Alx4O35137 Mir1894-201ENSMUST00000122802 81 ntBASIC10.95□□□□□ -0.66
Alx4O35137 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.95□□□□□ -0.66
Alx4O35137 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.95□□□□□ -0.66
Alx4O35137 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.95□□□□□ -0.66
Alx4O35137 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Gm2423-201ENSMUST00000074863 733 ntBASIC10.95□□□□□ -0.66
Alx4O35137 Gm26232-201ENSMUST00000083360 166 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms