Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr1aO35134 Matn2-206ENSMUST00000228570 2798 ntBASIC18.55■□□□□ 0.56
Polr1aO35134 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Polr1aO35134 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC18.54■□□□□ 0.56
Polr1aO35134 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC18.54■□□□□ 0.56
Polr1aO35134 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC18.54■□□□□ 0.56
Polr1aO35134 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC18.54■□□□□ 0.56
Polr1aO35134 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC18.54■□□□□ 0.56
Polr1aO35134 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC18.54■□□□□ 0.56
Polr1aO35134 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC18.54■□□□□ 0.56
Polr1aO35134 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Polr1aO35134 Gm5982-201ENSMUST00000196234 512 ntBASIC18.54■□□□□ 0.56
Polr1aO35134 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 CT009536.2-201ENSMUST00000225370 665 ntBASIC18.54■□□□□ 0.56
Polr1aO35134 AC164437.3-201ENSMUST00000228323 347 ntBASIC18.54■□□□□ 0.56
Polr1aO35134 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Polr1aO35134 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Polr1aO35134 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Polr1aO35134 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.54■□□□□ 0.56
Polr1aO35134 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Polr1aO35134 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC18.54■□□□□ 0.56
Polr1aO35134 AC134869.4-202ENSMUST00000224350 837 ntBASIC18.54■□□□□ 0.56
Polr1aO35134 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Polr1aO35134 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC18.53■□□□□ 0.56
Polr1aO35134 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Polr1aO35134 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Polr1aO35134 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC18.53■□□□□ 0.56
Polr1aO35134 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Gm12816-201ENSMUST00000118069 1212 ntBASIC18.53■□□□□ 0.56
Polr1aO35134 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC18.53■□□□□ 0.56
Polr1aO35134 Gm42816-201ENSMUST00000198433 325 ntBASIC18.53■□□□□ 0.56
Polr1aO35134 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC18.53■□□□□ 0.56
Polr1aO35134 Gm9111-201ENSMUST00000219394 709 ntBASIC18.53■□□□□ 0.56
Polr1aO35134 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
Polr1aO35134 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
Polr1aO35134 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 AC130823.1-201ENSMUST00000228929 1549 ntBASIC18.53■□□□□ 0.56
Polr1aO35134 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Polr1aO35134 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr1aO35134 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Polr1aO35134 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 Gm12990-201ENSMUST00000120372 468 ntBASIC18.52■□□□□ 0.56
Polr1aO35134 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC18.52■□□□□ 0.56
Polr1aO35134 Gm18561-201ENSMUST00000206027 804 ntBASIC18.52■□□□□ 0.56
Polr1aO35134 AC164618.2-201ENSMUST00000224770 573 ntBASIC18.52■□□□□ 0.56
Polr1aO35134 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Polr1aO35134 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 Gm8325-201ENSMUST00000099086 453 ntBASIC18.52■□□□□ 0.56
Polr1aO35134 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC18.52■□□□□ 0.56
Polr1aO35134 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC18.52■□□□□ 0.56
Polr1aO35134 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Polr1aO35134 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Polr1aO35134 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr1aO35134 Ssr1-203ENSMUST00000225246 1825 ntBASIC18.52■□□□□ 0.55
Polr1aO35134 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms