Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm27844-201ENSMUST00000183613 62 ntBASIC12.8□□□□□ -0.36
Ebf3O08791 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.8□□□□□ -0.36
Ebf3O08791 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.8□□□□□ -0.36
Ebf3O08791 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ebf3O08791 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ebf3O08791 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ebf3O08791 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.79□□□□□ -0.36
Ebf3O08791 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ebf3O08791 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Ebf3O08791 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.79□□□□□ -0.36
Ebf3O08791 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.79□□□□□ -0.36
Ebf3O08791 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.79□□□□□ -0.36
Ebf3O08791 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ebf3O08791 Gm5523-201ENSMUST00000180415 997 ntBASIC12.79□□□□□ -0.36
Ebf3O08791 Gm44100-201ENSMUST00000204329 436 ntBASIC12.79□□□□□ -0.36
Ebf3O08791 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.79□□□□□ -0.36
Ebf3O08791 Gm45598-202ENSMUST00000210719 986 ntBASIC12.79□□□□□ -0.36
Ebf3O08791 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.79□□□□□ -0.36
Ebf3O08791 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.79□□□□□ -0.36
Ebf3O08791 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ebf3O08791 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ebf3O08791 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ebf3O08791 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.79□□□□□ -0.36
Ebf3O08791 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf3O08791 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ebf3O08791 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ebf3O08791 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.78□□□□□ -0.36
Ebf3O08791 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.78□□□□□ -0.36
Ebf3O08791 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.78□□□□□ -0.36
Ebf3O08791 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.78□□□□□ -0.36
Ebf3O08791 Gm18730-201ENSMUST00000218038 343 ntBASIC12.78□□□□□ -0.36
Ebf3O08791 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.78□□□□□ -0.36
Ebf3O08791 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.78□□□□□ -0.36
Ebf3O08791 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ebf3O08791 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ebf3O08791 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf3O08791 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ebf3O08791 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf3O08791 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf3O08791 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf3O08791 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf3O08791 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf3O08791 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf3O08791 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf3O08791 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf3O08791 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf3O08791 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf3O08791 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf3O08791 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf3O08791 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf3O08791 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf3O08791 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms