Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Raet1bO08603 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.9□□□□□ -0.66
Raet1bO08603 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.9□□□□□ -0.66
Raet1bO08603 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Raet1bO08603 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Raet1bO08603 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Gm4986-201ENSMUST00000119731 549 ntBASIC10.9□□□□□ -0.66
Raet1bO08603 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.9□□□□□ -0.66
Raet1bO08603 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.9□□□□□ -0.66
Raet1bO08603 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Gm25043-201ENSMUST00000158604 212 ntBASIC10.9□□□□□ -0.66
Raet1bO08603 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.9□□□□□ -0.66
Raet1bO08603 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.9□□□□□ -0.66
Raet1bO08603 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.9□□□□□ -0.66
Raet1bO08603 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Raet1bO08603 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.9□□□□□ -0.66
Raet1bO08603 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.9□□□□□ -0.66
Raet1bO08603 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1bO08603 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.9□□□□□ -0.66
Raet1bO08603 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
Raet1bO08603 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1bO08603 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1bO08603 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1bO08603 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.9□□□□□ -0.67
Raet1bO08603 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1bO08603 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Raet1bO08603 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Raet1bO08603 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Raet1bO08603 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Raet1bO08603 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Raet1bO08603 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Raet1bO08603 Gm13786-201ENSMUST00000122371 333 ntBASIC10.89□□□□□ -0.67
Raet1bO08603 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Raet1bO08603 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Raet1bO08603 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.89□□□□□ -0.67
Raet1bO08603 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.89□□□□□ -0.67
Raet1bO08603 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Raet1bO08603 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1bO08603 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1bO08603 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1bO08603 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.89□□□□□ -0.67
Raet1bO08603 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
Raet1bO08603 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1bO08603 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Raet1bO08603 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1bO08603 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1bO08603 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.88□□□□□ -0.67
Raet1bO08603 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.88□□□□□ -0.67
Raet1bO08603 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1bO08603 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.88□□□□□ -0.67
Raet1bO08603 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Raet1bO08603 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1bO08603 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1bO08603 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1bO08603 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms