Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Gm38241-201ENSMUST00000192641 898 ntBASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh11xF6ZNL5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Mir877-201ENSMUST00000104738 85 ntBASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh11xF6ZNL5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Gm23912-201ENSMUST00000104687 87 ntBASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh11xF6ZNL5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh11xF6ZNL5 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh11xF6ZNL5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh11xF6ZNL5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh11xF6ZNL5 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms