Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Gm14381-201ENSMUST00000122105 414 ntBASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Gm7584-201ENSMUST00000175829 940 ntBASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cpsf4lE9Q2N0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Gm23912-201ENSMUST00000104687 87 ntBASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Gm14109-201ENSMUST00000118814 309 ntBASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Gm13350-201ENSMUST00000120519 479 ntBASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Rprl1-201ENSMUST00000158050 327 ntBASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Gm27046-201ENSMUST00000182160 463 ntBASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Gm8885-201ENSMUST00000189382 598 ntBASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Gm37259-201ENSMUST00000193903 849 ntBASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cpsf4lE9Q2N0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms