Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Gm18711-201ENSMUST00000199341 750 ntBASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn2B2RVW2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Gm11663-201ENSMUST00000117888 290 ntBASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Gm15595-201ENSMUST00000120840 961 ntBASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Mir6958-201ENSMUST00000184207 73 ntBASIC14.18□□□□□ -0.14
Clrn2B2RVW2 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Gm8956-201ENSMUST00000203939 825 ntBASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Gm45550-201ENSMUST00000209380 946 ntBASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clrn2B2RVW2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Gm16397-201ENSMUST00000122201 494 ntBASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Gm43058-201ENSMUST00000197645 625 ntBASIC14.17□□□□□ -0.14
Clrn2B2RVW2 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms