Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Gm14892-201ENSMUST00000117636 267 ntBASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Gm18776-201ENSMUST00000188833 654 ntBASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Gm5996-201ENSMUST00000211110 718 ntBASIC15.47■□□□□ 0.07
Scn7aB1AYL1 CT573047.1-201ENSMUST00000223652 851 ntBASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.47■□□□□ 0.07
Scn7aB1AYL1 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Gm12990-201ENSMUST00000120372 468 ntBASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Gm42599-201ENSMUST00000201308 469 ntBASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Gm3726-201ENSMUST00000203110 785 ntBASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Gm4811-201ENSMUST00000220879 1220 ntBASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Gm23680-201ENSMUST00000083162 164 ntBASIC15.46■□□□□ 0.07
Scn7aB1AYL1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scn7aB1AYL1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scn7aB1AYL1 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Scn7aB1AYL1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Scn7aB1AYL1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Scn7aB1AYL1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scn7aB1AYL1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Gm25880-201ENSMUST00000104331 132 ntBASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Gm17192-201ENSMUST00000169031 511 ntBASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Gm45594-201ENSMUST00000211717 241 ntBASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Gm30671-201ENSMUST00000214898 318 ntBASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Gm16380-201ENSMUST00000077997 478 ntBASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Gm36970-201ENSMUST00000193688 1859 ntBASIC15.45■□□□□ 0.06
Scn7aB1AYL1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn7aB1AYL1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Gm14071-201ENSMUST00000117817 509 ntBASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Gm14219-201ENSMUST00000120414 288 ntBASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Gm29155-201ENSMUST00000185910 269 ntBASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Gm39288-201ENSMUST00000210554 446 ntBASIC15.44■□□□□ 0.06
Scn7aB1AYL1 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 AC122346.3-201ENSMUST00000223983 306 ntBASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Gm7224-201ENSMUST00000121359 2066 ntBASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Gm18294-201ENSMUST00000176980 1748 ntBASIC15.44■□□□□ 0.06
Scn7aB1AYL1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms