Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Gm8738-201ENSMUST00000172606 329 ntBASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Paupar-201ENSMUST00000194826 3482 ntBASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Gm4034-201ENSMUST00000187674 480 ntBASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc194A0A140LIT1 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.21□□□□□ -0.46
Ccdc194A0A140LIT1 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms