Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Gm4034-201ENSMUST00000187674 480 ntBASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf4Q9QZS2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Gm13453-201ENSMUST00000118708 357 ntBASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Gm24136-201ENSMUST00000083374 165 ntBASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf4Q9QZS2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Gm16296-201ENSMUST00000159905 325 ntBASIC12.4□□□□□ -0.42
Rnf4Q9QZS2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms