Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Trem1Q9JKE2 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trem1Q9JKE2 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trem1Q9JKE2 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.01□□□□□ -0.65
Trem1Q9JKE2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trem1Q9JKE2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.01□□□□□ -0.65
Trem1Q9JKE2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trem1Q9JKE2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Trem1Q9JKE2 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trem1Q9JKE2 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trem1Q9JKE2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
Trem1Q9JKE2 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11□□□□□ -0.65
Trem1Q9JKE2 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11□□□□□ -0.65
Trem1Q9JKE2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11□□□□□ -0.65
Trem1Q9JKE2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11□□□□□ -0.65
Trem1Q9JKE2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11□□□□□ -0.65
Trem1Q9JKE2 Gm27622-201ENSMUST00000183779 60 ntBASIC11□□□□□ -0.65
Trem1Q9JKE2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11□□□□□ -0.65
Trem1Q9JKE2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11□□□□□ -0.65
Trem1Q9JKE2 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trem1Q9JKE2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trem1Q9JKE2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Gm10417-201ENSMUST00000194341 3522 ntBASIC11□□□□□ -0.65
Trem1Q9JKE2 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trem1Q9JKE2 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm12403-201ENSMUST00000121384 959 ntBASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trem1Q9JKE2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trem1Q9JKE2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms