Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl28Q9JIL2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Gm8131-201ENSMUST00000213783 1570 ntBASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Gm13492-201ENSMUST00000119772 665 ntBASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Gm12502-201ENSMUST00000120197 444 ntBASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Gm8227-201ENSMUST00000223306 571 ntBASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ccl28Q9JIL2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Gm16177-201ENSMUST00000120728 718 ntBASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Gm11964-201ENSMUST00000120982 444 ntBASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Gm1335-201ENSMUST00000121653 386 ntBASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Gm7063-201ENSMUST00000186840 981 ntBASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Gm38230-201ENSMUST00000193572 1159 ntBASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Gm43818-201ENSMUST00000200605 466 ntBASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl28Q9JIL2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Ccl28Q9JIL2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl28Q9JIL2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl28Q9JIL2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl28Q9JIL2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms