Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ube4bQ9ES00 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.81□□□□□ -0.52
Ube4bQ9ES00 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Gm28760-201ENSMUST00000185995 736 ntBASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Gm43094-201ENSMUST00000196549 921 ntBASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube4bQ9ES00 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Gm14057-201ENSMUST00000120631 482 ntBASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Gm38144-201ENSMUST00000192790 465 ntBASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Gm19078-201ENSMUST00000206311 727 ntBASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms