Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm5705-201ENSMUST00000066241 711 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.6□□□□□ -0.39
Nkx2-4Q9EQM3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Gm13022-201ENSMUST00000121181 285 ntBASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Gm4862-201ENSMUST00000170405 438 ntBASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Gm29410-201ENSMUST00000188383 694 ntBASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Gm29499-201ENSMUST00000189151 486 ntBASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Gm28329-201ENSMUST00000191208 689 ntBASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Gm29171-201ENSMUST00000191397 486 ntBASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-4Q9EQM3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx2-4Q9EQM3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx2-4Q9EQM3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx2-4Q9EQM3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx2-4Q9EQM3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx2-4Q9EQM3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Nkx2-4Q9EQM3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx2-4Q9EQM3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx2-4Q9EQM3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Gm16166-201ENSMUST00000118291 787 ntBASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Gm5257-201ENSMUST00000121823 790 ntBASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Gm15744-201ENSMUST00000161734 213 ntBASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-4Q9EQM3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms