Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne8Q9DC53 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne8Q9DC53 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.81□□□□□ -0.36
Cpne8Q9DC53 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne8Q9DC53 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne8Q9DC53 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Cpne8Q9DC53 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne8Q9DC53 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne8Q9DC53 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne8Q9DC53 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne8Q9DC53 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Gm25214-201ENSMUST00000104573 129 ntBASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Gm25043-201ENSMUST00000158604 212 ntBASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Mir7085-201ENSMUST00000184353 66 ntBASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Gm37424-201ENSMUST00000191727 561 ntBASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Gm37201-201ENSMUST00000191845 523 ntBASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Gm45880-201ENSMUST00000213041 853 ntBASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne8Q9DC53 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Gm12058-201ENSMUST00000118614 437 ntBASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.79□□□□□ -0.36
Cpne8Q9DC53 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpne8Q9DC53 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms