Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Gm16202-201ENSMUST00000117532 544 ntBASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Gm22175-201ENSMUST00000175007 78 ntBASIC12.42□□□□□ -0.42
Sf3a3Q9D554 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Chchd1-203ENSMUST00000224633 557 ntBASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sf3a3Q9D554 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Gm14760-201ENSMUST00000121831 999 ntBASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3a3Q9D554 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.4□□□□□ -0.42
Sf3a3Q9D554 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 241.9 ms