Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Gm4034-201ENSMUST00000187674 480 ntBASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Gm44872-201ENSMUST00000207864 420 ntBASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps33aQ9D2N9 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps33aQ9D2N9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 CT010480.4-201ENSMUST00000224654 2283 ntBASIC13□□□□□ -0.33
Vps33aQ9D2N9 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Gm24136-201ENSMUST00000083374 165 ntBASIC13□□□□□ -0.33
Vps33aQ9D2N9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps33aQ9D2N9 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps33aQ9D2N9 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps33aQ9D2N9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps33aQ9D2N9 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms