Protein–RNA interactions for Protein: Q9D0F6

Rfc5, Replication factor C subunit 5, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc5Q9D0F6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Gm11989-201ENSMUST00000117240 672 ntBASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Gm11362-201ENSMUST00000118838 850 ntBASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfc5Q9D0F6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Gm25116-201ENSMUST00000157191 122 ntBASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfc5Q9D0F6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfc5Q9D0F6 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.77□□□□□ -0.36
Rfc5Q9D0F6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rfc5Q9D0F6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rfc5Q9D0F6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Rfc5Q9D0F6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfc5Q9D0F6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfc5Q9D0F6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfc5Q9D0F6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Rfc5Q9D0F6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfc5Q9D0F6 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rfc5Q9D0F6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.77□□□□□ -0.36
Rfc5Q9D0F6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfc5Q9D0F6 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Gm44262-201ENSMUST00000204969 372 ntBASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Gm45186-201ENSMUST00000206874 478 ntBASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Gm45224-201ENSMUST00000208203 414 ntBASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfc5Q9D0F6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms