Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ssu72Q9CY97 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Gm24196-201ENSMUST00000179161 110 ntBASIC12.18□□□□□ -0.46
Ssu72Q9CY97 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms