Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx47Q9CWX9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Gm11618-201ENSMUST00000117946 267 ntBASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Gm15429-201ENSMUST00000151268 798 ntBASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Rmrp-201ENSMUST00000157463 271 ntBASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx47Q9CWX9 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx47Q9CWX9 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms