Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Gm18827-201ENSMUST00000188341 790 ntBASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm7Q9CQQ8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Gm24749-201ENSMUST00000157838 343 ntBASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Gm9630-201ENSMUST00000178304 885 ntBASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Mir6927-201ENSMUST00000184494 71 ntBASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Gm28450-201ENSMUST00000187349 638 ntBASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Lsm7Q9CQQ8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Gm23912-201ENSMUST00000104687 87 ntBASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Gm7857-201ENSMUST00000117957 358 ntBASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 AY036118-201ENSMUST00000200021 923 ntBASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms