Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.03□□□□□ -0.32
Rpa3Q9CQ71 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa3Q9CQ71 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa3Q9CQ71 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa3Q9CQ71 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa3Q9CQ71 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa3Q9CQ71 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa3Q9CQ71 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa3Q9CQ71 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa3Q9CQ71 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa3Q9CQ71 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Gm11222-201ENSMUST00000119005 738 ntBASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Gm2991-201ENSMUST00000173338 480 ntBASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Gm27516-201ENSMUST00000184237 98 ntBASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Gm28882-201ENSMUST00000185504 314 ntBASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa3Q9CQ71 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Gm44882-201ENSMUST00000205702 802 ntBASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rpa3Q9CQ71 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Gm11661-201ENSMUST00000121761 1327 ntBASIC13□□□□□ -0.33
Rpa3Q9CQ71 Gm25214-201ENSMUST00000104573 129 ntBASIC13□□□□□ -0.33
Rpa3Q9CQ71 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpa3Q9CQ71 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms