Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Gm9396-201ENSMUST00000076703 567 ntBASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.02□□□□□ -0.17
Trim11Q99PQ2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim11Q99PQ2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Gm6023-201ENSMUST00000118217 606 ntBASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Gm14999-201ENSMUST00000121039 624 ntBASIC14.01□□□□□ -0.17
Trim11Q99PQ2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Mir1982-201ENSMUST00000157368 74 ntBASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Snora78-201ENSMUST00000158630 128 ntBASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim11Q99PQ2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14□□□□□ -0.17
Trim11Q99PQ2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim11Q99PQ2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14□□□□□ -0.17
Trim11Q99PQ2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim11Q99PQ2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim11Q99PQ2 Gm13316-201ENSMUST00000140537 691 ntBASIC14□□□□□ -0.17
Trim11Q99PQ2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14□□□□□ -0.17
Trim11Q99PQ2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14□□□□□ -0.17
Trim11Q99PQ2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14□□□□□ -0.17
Trim11Q99PQ2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14□□□□□ -0.17
Trim11Q99PQ2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14□□□□□ -0.17
Trim11Q99PQ2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim11Q99PQ2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim11Q99PQ2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14□□□□□ -0.17
Trim11Q99PQ2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim11Q99PQ2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim11Q99PQ2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim11Q99PQ2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim11Q99PQ2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms