Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Mir1247-201ENSMUST00000116706 82 ntBASIC12.3□□□□□ -0.44
Trim33Q99PP7 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Gm6013-201ENSMUST00000212264 699 ntBASIC12.3□□□□□ -0.44
Trim33Q99PP7 AC154757.2-201ENSMUST00000228885 743 ntBASIC12.3□□□□□ -0.44
Trim33Q99PP7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.3□□□□□ -0.44
Trim33Q99PP7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.3□□□□□ -0.44
Trim33Q99PP7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.3□□□□□ -0.44
Trim33Q99PP7 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.3□□□□□ -0.44
Trim33Q99PP7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim33Q99PP7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim33Q99PP7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim33Q99PP7 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC12.29□□□□□ -0.44
Trim33Q99PP7 Gm42627-201ENSMUST00000197347 224 ntBASIC12.29□□□□□ -0.44
Trim33Q99PP7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim33Q99PP7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Gm9899-201ENSMUST00000065519 555 ntBASIC12.29□□□□□ -0.44
Trim33Q99PP7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim33Q99PP7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.29□□□□□ -0.44
Trim33Q99PP7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim33Q99PP7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim33Q99PP7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Gm13316-201ENSMUST00000140537 691 ntBASIC12.28□□□□□ -0.44
Trim33Q99PP7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Gm8018-201ENSMUST00000173536 789 ntBASIC12.28□□□□□ -0.44
Trim33Q99PP7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms