Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim8Q99PJ2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gm8213-201ENSMUST00000118191 441 ntBASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gm9002-201ENSMUST00000178437 499 ntBASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gm37497-201ENSMUST00000195830 798 ntBASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gm8227-201ENSMUST00000223306 571 ntBASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim8Q99PJ2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.07□□□□□ -0.48
Trim8Q99PJ2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim8Q99PJ2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.06□□□□□ -0.48
Trim8Q99PJ2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms