Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gm26875-201ENSMUST00000181006 950 ntBASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.18□□□□□ -0.46
Cdh23Q99PF4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Gm12986-201ENSMUST00000119037 967 ntBASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Gm9625-201ENSMUST00000180422 955 ntBASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Gm7627-201ENSMUST00000183205 999 ntBASIC12.17□□□□□ -0.46
Cdh23Q99PF4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Gm9204-201ENSMUST00000212641 947 ntBASIC12.17□□□□□ -0.46
Cdh23Q99PF4 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh23Q99PF4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 AC137950.2-202ENSMUST00000227150 1635 ntBASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm25677-201ENSMUST00000174983 72 ntBASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm5449-201ENSMUST00000081132 357 ntBASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm8459-201ENSMUST00000162504 760 ntBASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh23Q99PF4 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.15□□□□□ -0.46
Cdh23Q99PF4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Gm37826-201ENSMUST00000195329 322 ntBASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Gm7940-201ENSMUST00000218195 769 ntBASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Gm26670-202ENSMUST00000226862 340 ntBASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Olfr584-201ENSMUST00000098210 964 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms