Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm27844-201ENSMUST00000183613 62 ntBASIC13.08□□□□□ -0.32
Sf3b1Q99NB9 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.08□□□□□ -0.32
Sf3b1Q99NB9 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b1Q99NB9 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sf3b1Q99NB9 Gm26035-201ENSMUST00000083065 308 ntBASIC13.08□□□□□ -0.32
Sf3b1Q99NB9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.08□□□□□ -0.32
Sf3b1Q99NB9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.08□□□□□ -0.32
Sf3b1Q99NB9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b1Q99NB9 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.08□□□□□ -0.32
Sf3b1Q99NB9 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.08□□□□□ -0.32
Sf3b1Q99NB9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3b1Q99NB9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Gm12380-201ENSMUST00000119012 544 ntBASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Gm11331-201ENSMUST00000119764 288 ntBASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Gm28071-201ENSMUST00000190355 478 ntBASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Gm42997-202ENSMUST00000200321 985 ntBASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sf3b1Q99NB9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b1Q99NB9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Sf3b1Q99NB9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b1Q99NB9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b1Q99NB9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b1Q99NB9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b1Q99NB9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.05□□□□□ -0.32
Sf3b1Q99NB9 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b1Q99NB9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms