Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.6□□□□□ -0.55
Nkd1Q99MH6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nkd1Q99MH6 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Map1b-203ENSMUST00000223725 2669 ntBASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Gm38092-201ENSMUST00000195600 653 ntBASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nkd1Q99MH6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Nkd1Q99MH6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nkd1Q99MH6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Nkd1Q99MH6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Gm12490-201ENSMUST00000120255 560 ntBASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Gm5904-201ENSMUST00000210286 865 ntBASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Gm8227-201ENSMUST00000223306 571 ntBASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Gm6091-201ENSMUST00000098307 165 ntBASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms