Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Gm37424-201ENSMUST00000191727 561 ntBASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Gm10478-201ENSMUST00000084451 396 ntBASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp1b1Q99LU0 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Gm16379-201ENSMUST00000161469 348 ntBASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Gm8738-201ENSMUST00000172606 329 ntBASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Gm27572-201ENSMUST00000183702 255 ntBASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Gm8762-201ENSMUST00000193486 339 ntBASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp1b1Q99LU0 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chmp1b1Q99LU0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chmp1b1Q99LU0 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chmp1b1Q99LU0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chmp1b1Q99LU0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chmp1b1Q99LU0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chmp1b1Q99LU0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chmp1b1Q99LU0 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms