Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.97□□□□□ -0.33
Clp1Q99LI9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clp1Q99LI9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.96□□□□□ -0.33
Clp1Q99LI9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clp1Q99LI9 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Gm23912-201ENSMUST00000104687 87 ntBASIC12.96□□□□□ -0.33
Clp1Q99LI9 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Gm12516-201ENSMUST00000120819 385 ntBASIC12.96□□□□□ -0.33
Clp1Q99LI9 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Gm23045-201ENSMUST00000175041 96 ntBASIC12.96□□□□□ -0.33
Clp1Q99LI9 Gm25072-201ENSMUST00000175233 235 ntBASIC12.96□□□□□ -0.33
Clp1Q99LI9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Mir8115-201ENSMUST00000184992 119 ntBASIC12.96□□□□□ -0.33
Clp1Q99LI9 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.96□□□□□ -0.33
Clp1Q99LI9 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.96□□□□□ -0.33
Clp1Q99LI9 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.96□□□□□ -0.33
Clp1Q99LI9 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.96□□□□□ -0.33
Clp1Q99LI9 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.96□□□□□ -0.33
Clp1Q99LI9 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.96□□□□□ -0.33
Clp1Q99LI9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clp1Q99LI9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clp1Q99LI9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clp1Q99LI9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clp1Q99LI9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clp1Q99LI9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clp1Q99LI9 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Clp1Q99LI9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
Clp1Q99LI9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clp1Q99LI9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clp1Q99LI9 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.95□□□□□ -0.34
Clp1Q99LI9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Gm13899-201ENSMUST00000121519 1255 ntBASIC12.95□□□□□ -0.34
Clp1Q99LI9 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Gm8815-201ENSMUST00000173809 620 ntBASIC12.95□□□□□ -0.34
Clp1Q99LI9 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.95□□□□□ -0.34
Clp1Q99LI9 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Gm6407-201ENSMUST00000176468 549 ntBASIC12.95□□□□□ -0.34
Clp1Q99LI9 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.95□□□□□ -0.34
Clp1Q99LI9 CT009754.4-201ENSMUST00000221430 565 ntBASIC12.95□□□□□ -0.34
Clp1Q99LI9 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Clp1Q99LI9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.95□□□□□ -0.34
Clp1Q99LI9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.95□□□□□ -0.34
Clp1Q99LI9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms