Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Mir874-201ENSMUST00000104769 76 ntBASIC14.24□□□□□ -0.13
Smc1bQ920F6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Gm15131-201ENSMUST00000119124 595 ntBASIC14.24□□□□□ -0.13
Smc1bQ920F6 Gm8566-201ENSMUST00000120174 465 ntBASIC14.24□□□□□ -0.13
Smc1bQ920F6 Gm14704-201ENSMUST00000120300 874 ntBASIC14.24□□□□□ -0.13
Smc1bQ920F6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Gm23699-201ENSMUST00000158835 135 ntBASIC14.24□□□□□ -0.13
Smc1bQ920F6 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.24□□□□□ -0.13
Smc1bQ920F6 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.24□□□□□ -0.13
Smc1bQ920F6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc1bQ920F6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Gm11597-201ENSMUST00000121423 964 ntBASIC14.23□□□□□ -0.13
Smc1bQ920F6 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Gm24749-201ENSMUST00000157838 343 ntBASIC14.23□□□□□ -0.13
Smc1bQ920F6 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Rprl1-202ENSMUST00000198476 238 ntBASIC14.23□□□□□ -0.13
Smc1bQ920F6 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.23□□□□□ -0.13
Smc1bQ920F6 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.23□□□□□ -0.13
Smc1bQ920F6 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.23□□□□□ -0.13
Smc1bQ920F6 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.23□□□□□ -0.13
Smc1bQ920F6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smc1bQ920F6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smc1bQ920F6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Gm13408-201ENSMUST00000119822 798 ntBASIC14.22□□□□□ -0.13
Smc1bQ920F6 Gm13935-201ENSMUST00000121859 798 ntBASIC14.22□□□□□ -0.13
Smc1bQ920F6 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Gm7003-201ENSMUST00000195089 312 ntBASIC14.22□□□□□ -0.13
Smc1bQ920F6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.22□□□□□ -0.13
Smc1bQ920F6 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.22□□□□□ -0.13
Smc1bQ920F6 Gm7848-201ENSMUST00000210739 718 ntBASIC14.22□□□□□ -0.13
Smc1bQ920F6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.22□□□□□ -0.13
Smc1bQ920F6 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Gm10312-201ENSMUST00000078515 489 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms