Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Gm5070-201ENSMUST00000177599 862 ntBASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Gm9230-201ENSMUST00000188228 532 ntBASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Gm42599-201ENSMUST00000201308 469 ntBASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Gm13097-201ENSMUST00000210722 397 ntBASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 AC125117.2-201ENSMUST00000228344 1140 ntBASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 AC124408.1-201ENSMUST00000228938 707 ntBASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb22Q91XZ8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Gm13366-201ENSMUST00000122198 970 ntBASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 CT010486.3-201ENSMUST00000224555 811 ntBASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb22Q91XZ8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb22Q91XZ8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms