Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Gm13392-201ENSMUST00000117708 150 ntBASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Gm1335-201ENSMUST00000121653 386 ntBASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Gm27682-201ENSMUST00000183930 110 ntBASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhga11Q91XY8 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.96□□□□□ -0.5
Pcdhga11Q91XY8 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.96□□□□□ -0.5
Pcdhga11Q91XY8 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.96□□□□□ -0.5
Pcdhga11Q91XY8 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhga11Q91XY8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhga11Q91XY8 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhga11Q91XY8 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhga11Q91XY8 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhga11Q91XY8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhga11Q91XY8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Pcdhga11Q91XY8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Gm13323-201ENSMUST00000120245 1151 ntBASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Gm6007-201ENSMUST00000208170 823 ntBASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Gm45930-201ENSMUST00000221330 292 ntBASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga11Q91XY8 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Gm11964-201ENSMUST00000120982 444 ntBASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Gm27390-201ENSMUST00000184516 176 ntBASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Gm18584-201ENSMUST00000203098 964 ntBASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms