Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tram1Q91V04 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tram1Q91V04 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tram1Q91V04 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Tram1Q91V04 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Tram1Q91V04 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Tram1Q91V04 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tram1Q91V04 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Tram1Q91V04 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Tram1Q91V04 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Tram1Q91V04 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tram1Q91V04 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tram1Q91V04 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tram1Q91V04 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.59□□□□□ -0.71
Tram1Q91V04 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tram1Q91V04 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tram1Q91V04 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tram1Q91V04 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tram1Q91V04 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tram1Q91V04 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Tram1Q91V04 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.58□□□□□ -0.72
Tram1Q91V04 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Tram1Q91V04 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Gm27838-201ENSMUST00000184829 128 ntBASIC10.58□□□□□ -0.72
Tram1Q91V04 Gm4034-201ENSMUST00000187674 480 ntBASIC10.58□□□□□ -0.72
Tram1Q91V04 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.58□□□□□ -0.72
Tram1Q91V04 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Gm19220-201ENSMUST00000222682 803 ntBASIC10.58□□□□□ -0.72
Tram1Q91V04 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.58□□□□□ -0.72
Tram1Q91V04 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.58□□□□□ -0.72
Tram1Q91V04 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Tram1Q91V04 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.58□□□□□ -0.72
Tram1Q91V04 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tram1Q91V04 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tram1Q91V04 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Tram1Q91V04 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tram1Q91V04 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tram1Q91V04 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tram1Q91V04 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tram1Q91V04 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Tram1Q91V04 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Tram1Q91V04 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.57□□□□□ -0.72
Tram1Q91V04 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tram1Q91V04 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tram1Q91V04 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tram1Q91V04 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tram1Q91V04 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Tram1Q91V04 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tram1Q91V04 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tram1Q91V04 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tram1Q91V04 Gm13223-201ENSMUST00000118609 747 ntBASIC10.57□□□□□ -0.72
Tram1Q91V04 Gm6152-201ENSMUST00000151704 340 ntBASIC10.57□□□□□ -0.72
Tram1Q91V04 Rmrp-201ENSMUST00000157463 271 ntBASIC10.57□□□□□ -0.72
Tram1Q91V04 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.57□□□□□ -0.72
Tram1Q91V04 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.57□□□□□ -0.72
Tram1Q91V04 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tram1Q91V04 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.57□□□□□ -0.72
Tram1Q91V04 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.57□□□□□ -0.72
Tram1Q91V04 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms