Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TraipQ8VIG6 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Gm43378-201ENSMUST00000199336 582 ntBASIC13.18□□□□□ -0.3
TraipQ8VIG6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.18□□□□□ -0.3
TraipQ8VIG6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.18□□□□□ -0.3
TraipQ8VIG6 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.17□□□□□ -0.3
TraipQ8VIG6 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Gm7340-201ENSMUST00000119729 2752 ntBASIC13.17□□□□□ -0.3
TraipQ8VIG6 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 AC154806.5-202ENSMUST00000227217 1443 ntBASIC13.17□□□□□ -0.3
TraipQ8VIG6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Gm15711-201ENSMUST00000118889 535 ntBASIC13.17□□□□□ -0.3
TraipQ8VIG6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Gm8343-201ENSMUST00000182705 994 ntBASIC13.17□□□□□ -0.3
TraipQ8VIG6 Mir7677-201ENSMUST00000184226 67 ntBASIC13.17□□□□□ -0.3
TraipQ8VIG6 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.17□□□□□ -0.3
TraipQ8VIG6 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.17□□□□□ -0.3
TraipQ8VIG6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.17□□□□□ -0.3
TraipQ8VIG6 AC154757.2-201ENSMUST00000228885 743 ntBASIC13.17□□□□□ -0.3
TraipQ8VIG6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.17□□□□□ -0.3
TraipQ8VIG6 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.17□□□□□ -0.3
TraipQ8VIG6 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Cd8a-202ENSMUST00000172321 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TraipQ8VIG6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Gm38123-201ENSMUST00000194990 2779 ntBASIC13.16□□□□□ -0.3
TraipQ8VIG6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.16□□□□□ -0.3
TraipQ8VIG6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.16□□□□□ -0.3
TraipQ8VIG6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.16□□□□□ -0.3
TraipQ8VIG6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Gm26286-201ENSMUST00000104166 134 ntBASIC13.16□□□□□ -0.3
TraipQ8VIG6 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 B9d1os-201ENSMUST00000137010 674 ntBASIC13.16□□□□□ -0.3
TraipQ8VIG6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.16□□□□□ -0.3
TraipQ8VIG6 Mir6979-201ENSMUST00000183927 56 ntBASIC13.16□□□□□ -0.3
TraipQ8VIG6 Gm28923-201ENSMUST00000187755 322 ntBASIC13.16□□□□□ -0.3
TraipQ8VIG6 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms