Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim60Q8VI40 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim60Q8VI40 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.72□□□□□ -0.37
Trim60Q8VI40 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.72□□□□□ -0.37
Trim60Q8VI40 Gm43438-201ENSMUST00000198133 379 ntBASIC12.72□□□□□ -0.37
Trim60Q8VI40 Gm44405-201ENSMUST00000198952 126 ntBASIC12.72□□□□□ -0.37
Trim60Q8VI40 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Gm22058-201ENSMUST00000083393 310 ntBASIC12.72□□□□□ -0.37
Trim60Q8VI40 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.72□□□□□ -0.37
Trim60Q8VI40 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim60Q8VI40 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim60Q8VI40 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim60Q8VI40 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.71□□□□□ -0.37
Trim60Q8VI40 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim60Q8VI40 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim60Q8VI40 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim60Q8VI40 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim60Q8VI40 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim60Q8VI40 Gm12502-201ENSMUST00000120197 444 ntBASIC12.71□□□□□ -0.37
Trim60Q8VI40 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim60Q8VI40 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Trim60Q8VI40 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim60Q8VI40 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.71□□□□□ -0.37
Trim60Q8VI40 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim60Q8VI40 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim60Q8VI40 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim60Q8VI40 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim60Q8VI40 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim60Q8VI40 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim60Q8VI40 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim60Q8VI40 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.38
Trim60Q8VI40 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim60Q8VI40 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.71□□□□□ -0.38
Trim60Q8VI40 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.71□□□□□ -0.38
Trim60Q8VI40 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.7□□□□□ -0.38
Trim60Q8VI40 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.7□□□□□ -0.38
Trim60Q8VI40 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Gm1335-201ENSMUST00000121653 386 ntBASIC12.7□□□□□ -0.38
Trim60Q8VI40 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.7□□□□□ -0.38
Trim60Q8VI40 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms