Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Gm24255-201ENSMUST00000104481 128 ntBASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Gm14644-201ENSMUST00000116671 647 ntBASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Gm12015-201ENSMUST00000117065 843 ntBASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Rprl1-201ENSMUST00000158050 327 ntBASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Gm38341-201ENSMUST00000195357 515 ntBASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Gm19994-201ENSMUST00000217086 586 ntBASIC13.49□□□□□ -0.25
Rpap2Q8VC34 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpap2Q8VC34 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Gm44364-201ENSMUST00000198368 141 ntBASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Gm43179-201ENSMUST00000198797 275 ntBASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Gm43758-201ENSMUST00000199500 367 ntBASIC13.48□□□□□ -0.25
Rpap2Q8VC34 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rpap2Q8VC34 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms