Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Gm26083-201ENSMUST00000157904 193 ntBASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Gm9630-201ENSMUST00000178304 885 ntBASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Gm10312-201ENSMUST00000078515 489 ntBASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vmn1r28Q8R2C9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Gm24934-201ENSMUST00000103764 111 ntBASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vmn1r28Q8R2C9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms