Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Gm13616-201ENSMUST00000120600 222 ntBASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Gm27838-201ENSMUST00000184829 128 ntBASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cgref1Q8R1U2 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Gm13813-201ENSMUST00000120998 787 ntBASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Gm5354-201ENSMUST00000182417 973 ntBASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.53□□□□□ -0.4
Cgref1Q8R1U2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cgref1Q8R1U2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cgref1Q8R1U2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.52□□□□□ -0.4
Cgref1Q8R1U2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cgref1Q8R1U2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
Cgref1Q8R1U2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cgref1Q8R1U2 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cgref1Q8R1U2 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cgref1Q8R1U2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cgref1Q8R1U2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cgref1Q8R1U2 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cgref1Q8R1U2 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.52□□□□□ -0.4
Cgref1Q8R1U2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Gm28760-201ENSMUST00000185995 736 ntBASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Gm29667-201ENSMUST00000190817 490 ntBASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Gm43575-201ENSMUST00000196420 516 ntBASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cgref1Q8R1U2 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms