Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.61□□□□□ -0.55
Clrn1Q8K445 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Gm12241-201ENSMUST00000118330 726 ntBASIC11.61□□□□□ -0.55
Clrn1Q8K445 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.61□□□□□ -0.55
Clrn1Q8K445 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.61□□□□□ -0.55
Clrn1Q8K445 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.61□□□□□ -0.55
Clrn1Q8K445 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Gm27516-201ENSMUST00000184237 98 ntBASIC11.61□□□□□ -0.55
Clrn1Q8K445 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.61□□□□□ -0.55
Clrn1Q8K445 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.61□□□□□ -0.55
Clrn1Q8K445 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.6□□□□□ -0.55
Clrn1Q8K445 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.6□□□□□ -0.55
Clrn1Q8K445 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Gm11531-201ENSMUST00000117614 555 ntBASIC11.6□□□□□ -0.55
Clrn1Q8K445 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.6□□□□□ -0.55
Clrn1Q8K445 Gm23119-201ENSMUST00000158610 140 ntBASIC11.6□□□□□ -0.55
Clrn1Q8K445 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Gm26956-201ENSMUST00000182176 986 ntBASIC11.6□□□□□ -0.55
Clrn1Q8K445 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Gm9368-201ENSMUST00000219348 831 ntBASIC11.6□□□□□ -0.55
Clrn1Q8K445 Gm8227-201ENSMUST00000223306 571 ntBASIC11.6□□□□□ -0.55
Clrn1Q8K445 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Gm9899-201ENSMUST00000065519 555 ntBASIC11.6□□□□□ -0.55
Clrn1Q8K445 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.6□□□□□ -0.55
Clrn1Q8K445 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clrn1Q8K445 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.59□□□□□ -0.55
Clrn1Q8K445 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Gm2991-201ENSMUST00000173338 480 ntBASIC11.59□□□□□ -0.55
Clrn1Q8K445 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Gm6334-201ENSMUST00000207083 228 ntBASIC11.59□□□□□ -0.55
Clrn1Q8K445 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Gm5950-201ENSMUST00000213337 772 ntBASIC11.59□□□□□ -0.55
Clrn1Q8K445 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.59□□□□□ -0.55
Clrn1Q8K445 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clrn1Q8K445 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.59□□□□□ -0.55
Clrn1Q8K445 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms