Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Gm43520-201ENSMUST00000197996 164 ntBASIC13.88□□□□□ -0.19
Syne4Q8CII8 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.88□□□□□ -0.19
Syne4Q8CII8 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.88□□□□□ -0.19
Syne4Q8CII8 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.88□□□□□ -0.19
Syne4Q8CII8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.87□□□□□ -0.19
Syne4Q8CII8 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.87□□□□□ -0.19
Syne4Q8CII8 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.87□□□□□ -0.19
Syne4Q8CII8 Gm14193-201ENSMUST00000105067 153 ntBASIC13.87□□□□□ -0.19
Syne4Q8CII8 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Mir1956-201ENSMUST00000157748 65 ntBASIC13.87□□□□□ -0.19
Syne4Q8CII8 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.87□□□□□ -0.19
Syne4Q8CII8 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Syne4Q8CII8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Gm22920-201ENSMUST00000102175 109 ntBASIC13.86□□□□□ -0.19
Syne4Q8CII8 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Gm13916-201ENSMUST00000117368 628 ntBASIC13.86□□□□□ -0.19
Syne4Q8CII8 Gm11660-201ENSMUST00000120955 412 ntBASIC13.86□□□□□ -0.19
Syne4Q8CII8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Gm8815-201ENSMUST00000173809 620 ntBASIC13.86□□□□□ -0.19
Syne4Q8CII8 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.86□□□□□ -0.19
Syne4Q8CII8 Gm4654-201ENSMUST00000183305 982 ntBASIC13.86□□□□□ -0.19
Syne4Q8CII8 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.86□□□□□ -0.19
Syne4Q8CII8 Gm2875-201ENSMUST00000211333 360 ntBASIC13.86□□□□□ -0.19
Syne4Q8CII8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms