Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.6□□□□□ -0.39
CopaQ8CIE6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CopaQ8CIE6 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Gm14726-201ENSMUST00000120623 896 ntBASIC12.59□□□□□ -0.39
CopaQ8CIE6 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.59□□□□□ -0.39
CopaQ8CIE6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.59□□□□□ -0.39
CopaQ8CIE6 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.59□□□□□ -0.39
CopaQ8CIE6 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.59□□□□□ -0.39
CopaQ8CIE6 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.59□□□□□ -0.39
CopaQ8CIE6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.59□□□□□ -0.39
CopaQ8CIE6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CopaQ8CIE6 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CopaQ8CIE6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CopaQ8CIE6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CopaQ8CIE6 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CopaQ8CIE6 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.58□□□□□ -0.4
CopaQ8CIE6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.58□□□□□ -0.4
CopaQ8CIE6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.58□□□□□ -0.4
CopaQ8CIE6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Gm23363-201ENSMUST00000175024 79 ntBASIC12.58□□□□□ -0.4
CopaQ8CIE6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.58□□□□□ -0.4
CopaQ8CIE6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.58□□□□□ -0.4
CopaQ8CIE6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.58□□□□□ -0.4
CopaQ8CIE6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CopaQ8CIE6 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms