Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rsph6aQ8CDR2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rsph6aQ8CDR2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rsph6aQ8CDR2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rsph6aQ8CDR2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Gm43980-201ENSMUST00000204899 1612 ntBASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Gm11331-201ENSMUST00000119764 288 ntBASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Gm12176-201ENSMUST00000121420 875 ntBASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Gm18711-201ENSMUST00000199341 750 ntBASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Gm7439-201ENSMUST00000214053 835 ntBASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Gm270-201ENSMUST00000223010 976 ntBASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rsph6aQ8CDR2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm24541-201ENSMUST00000103871 96 ntBASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm11450-201ENSMUST00000121144 333 ntBASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm25318-201ENSMUST00000122554 314 ntBASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm37986-201ENSMUST00000193285 383 ntBASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm18038-201ENSMUST00000197900 485 ntBASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm9555-201ENSMUST00000200908 583 ntBASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm4607-201ENSMUST00000206649 577 ntBASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm8038-201ENSMUST00000164674 2044 ntBASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC16.11■□□□□ 0.17
Rsph6aQ8CDR2 Gm28719-201ENSMUST00000187779 1757 ntBASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 Gm18829-201ENSMUST00000188150 1622 ntBASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 Gm14247-201ENSMUST00000120950 237 ntBASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 Gm23699-201ENSMUST00000158835 135 ntBASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC16.1■□□□□ 0.17
Rsph6aQ8CDR2 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms