Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Gm6013-201ENSMUST00000212264 699 ntBASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Pck2-205ENSMUST00000226352 2784 ntBASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Gm27501-201ENSMUST00000183599 107 ntBASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Gm18935-201ENSMUST00000212692 664 ntBASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trub1Q8C0D0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Gm42693-201ENSMUST00000196779 631 ntBASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms